Move Cephelepod into deprecated_compiler, create captian.sh to handle bootstrapping kraken from backup or from Cephelepod

deprecated_compiler/include/RemovalTransformation.h

@@ -0,0 +1,50 @@
+#ifndef REMOVALTRANSFORMATION_H
+#define REMOVALTRANSFORMATION_H
+
+#include <queue>
+#include <vector>
+
+#include "NodeTransformation.h"
+
+template<class T>
+class RemovalTransformation: public NodeTransformation<T,T> {
+	public:
+		RemovalTransformation(T toRemove);
+		~RemovalTransformation();
+		virtual NodeTree<T>* transform(NodeTree<T>* from);
+
+	private:
+		T toRemove;
+};
+
+#endif
+
+template<class T>
+RemovalTransformation<T>::RemovalTransformation(T toRemove) {
+	this->toRemove = toRemove;
+}
+
+template<class T>
+RemovalTransformation<T>::~RemovalTransformation() {
+	//
+}
+
+template<class T>
+NodeTree<T>* RemovalTransformation<T>::transform(NodeTree<T>* from) {
+	std::queue<NodeTree<T>*> toProcess;
+	toProcess.push(from);
+	while(!toProcess.empty()) {
+		NodeTree<T>* node = toProcess.front();
+		toProcess.pop();
+        if (!node)
+            continue;
+		std::vector<NodeTree<T>*> children = node->getChildren();
+		for (int i = 0; i < children.size(); i++) {
+			if (children[i]->getData() == toRemove)
+				node->removeChild(children[i]);
+			else if (children[i])
+				toProcess.push(children[i]);
+		}
+	}
+	return from;
+}