Move Cephelepod into deprecated_compiler, create captian.sh to handle bootstrapping kraken from backup or from Cephelepod

deprecated_compiler/src/Tester.cpp

@@ -0,0 +1,62 @@
+#include "Tester.h"
+
+Tester::Tester(std::string krakenInvocation, std::string krakenGrammerLocation) : krakenInvocation(krakenInvocation), krakenGrammerLocation(krakenGrammerLocation) {
+	//initlization list
+	removeCmd = "rm -r";
+	resultsExtention = ".results";
+	expectedExtention = ".expected_results";
+	krakenExtention = ".krak";
+	changePermissions = "chmod 755";
+	shell = "sh";
+    cd = "cd";
+	redirect = ">";
+	sep = "/";
+}
+
+Tester::~Tester() {
+	//Nothing
+}
+
+void Tester::cleanExtras(std::string fileName) {
+	ssystem(removeCmd + " " + fileName);
+}
+
+bool Tester::run(std::string path) {
+    std::string fileName = split(path, *sep.c_str()).back();
+	std::cout << "Testing: " << fileName << " with " << krakenInvocation << " and " << krakenGrammerLocation << std::endl;
+
+	cleanExtras(path);
+	ssystem(krakenInvocation + " " + path + krakenExtention + " " + path);
+    // done automatically now
+	//ssystem(changePermissions + " " + path + sep + fileName + ".sh");
+	//ssystem(cd + " " + path + "; " + "./" + fileName + ".sh");
+	//ssystem(changePermissions + " " + path + sep + fileName);
+	ssystem(path + sep + fileName + " " + redirect + " " + path + sep + fileName + resultsExtention);
+
+	bool result = compareFiles(fileName + expectedExtention, path + sep + fileName + resultsExtention);
+
+	//If the test was succesful, we don't need all the extra files
+	if (result)
+		cleanExtras(path);
+
+	return result;
+}
+
+bool Tester::compareFiles(std::string file1Path, std::string file2Path) {
+	std::ifstream file1, file2;
+	file1.open(file1Path);
+	if (!file1.is_open()) {
+		std::cout << file1Path << " could not be opened!" << std::endl;
+		return false;
+	}
+	file2.open(file2Path);
+	if (!file2.is_open()) {
+		std::cout << file2Path << " could not be opened!" << std::endl;
+		return false;
+	}
+
+	std::string file1contents = readFile(file1);
+	std::string file2contents = readFile(file2);
+
+	return file1contents.compare(file2contents) == 0;
+}